Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64918.1Putative reductase. (171 aa)    
Predicted Functional Partners:
AHF64919.1
Hypothetical protein; Belongs to the pirin family.
 
    0.682
AHF64917.1
Rubrerythrin; Belongs to the rubredoxin family.
       0.664
AHF64183.1
Hypothetical protein.
  
     0.541
AHF64043.1
Hypothetical protein.
  
     0.489
AHF64916.1
Hypothetical protein.
       0.477
AHF64005.1
Hypothetical protein.
  
     0.451
AHF64039.1
Hypothetical protein.
  
     0.451
AHF64920.1
Hypothetical protein.
       0.428
fpaA
Flavoprotein.
     
 0.417
AHF63526.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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