Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF64313.1 | AHF64439.1 | Syncc8109_1969 | Syncc8109_2101 | Biotin/lipoate A/B protein ligase family. | Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate. | 0.858 |
| AHF64313.1 | gcsH | Syncc8109_1969 | Syncc8109_2616 | Biotin/lipoate A/B protein ligase family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.964 |
| AHF64313.1 | gcvT | Syncc8109_1969 | Syncc8109_2659 | Biotin/lipoate A/B protein ligase family. | Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.499 |
| AHF64313.1 | lipB | Syncc8109_1969 | Syncc8109_2104 | Biotin/lipoate A/B protein ligase family. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.929 |
| AHF64313.1 | lpdA | Syncc8109_1969 | Syncc8109_1861 | Biotin/lipoate A/B protein ligase family. | Putative dihydrolipoamide dehydrogenase. | 0.702 |
| AHF64313.1 | pdhB | Syncc8109_1969 | Syncc8109_1491 | Biotin/lipoate A/B protein ligase family. | Pyruvate dehydrogenase E1 beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.822 |
| AHF64439.1 | AHF64313.1 | Syncc8109_2101 | Syncc8109_1969 | Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate. | Biotin/lipoate A/B protein ligase family. | 0.858 |
| AHF64439.1 | gcsH | Syncc8109_2101 | Syncc8109_2616 | Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.887 |
| AHF64439.1 | gcvP | Syncc8109_2101 | Syncc8109_2615 | Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.681 |
| AHF64439.1 | gcvT | Syncc8109_2101 | Syncc8109_2659 | Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate. | Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.661 |
| AHF64439.1 | lipB | Syncc8109_2101 | Syncc8109_2104 | Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.761 |
| AHF64439.1 | lpdA | Syncc8109_2101 | Syncc8109_1861 | Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate. | Putative dihydrolipoamide dehydrogenase. | 0.999 |
| AHF64439.1 | pdhB | Syncc8109_2101 | Syncc8109_1491 | Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate. | Pyruvate dehydrogenase E1 beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.999 |
| acpP | gcsH | Syncc8109_0149 | Syncc8109_2616 | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.847 |
| acpP | glyA | Syncc8109_0149 | Syncc8109_0252 | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.555 |
| acpP | lipB | Syncc8109_0149 | Syncc8109_2104 | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.855 |
| gcsH | AHF64313.1 | Syncc8109_2616 | Syncc8109_1969 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Biotin/lipoate A/B protein ligase family. | 0.964 |
| gcsH | AHF64439.1 | Syncc8109_2616 | Syncc8109_2101 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate. | 0.887 |
| gcsH | acpP | Syncc8109_2616 | Syncc8109_0149 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.847 |
| gcsH | gcvP | Syncc8109_2616 | Syncc8109_2615 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
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