STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64934.1Hypothetical protein. (180 aa)    
Predicted Functional Partners:
AHF63364.1
Hypothetical protein.
  
     0.716
AHF64227.1
Hypothetical protein.
  
     0.651
AHF63422.1
HTH of cAMP family transcriptional regulator.
  
     0.634
AHF64023.1
Hypothetical protein.
  
     0.621
AHF64397.1
Hypothetical protein.
  
     0.598
dnaQ
Putative DNA polymerase III, epsilon subunit.
  
     0.586
AHF63186.1
Hypothetical protein.
  
     0.577
AHF63526.1
Hypothetical protein.
  
     0.576
ligA
DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
       0.576
AHF64935.1
Hypothetical protein.
       0.575
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.