STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64940.1Putative multidrug efflux ABC transporter. (265 aa)    
Predicted Functional Partners:
AHF64941.1
ATPase.
 
  
 0.967
AHF64939.1
Hypothetical protein.
 
  
 0.964
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.775
AHF64938.1
Hypothetical protein.
       0.664
AHF64770.1
Hypothetical protein.
  
     0.638
AHF63339.1
Hypothetical protein.
  
     0.522
AHF64943.1
Hypothetical protein.
       0.467
AHF64944.1
Putative protein phosphatase 2A.
       0.467
psbT
Photosystem II reaction center T protein; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family.
  
     0.413
AHF63725.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.