STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64944.1Putative protein phosphatase 2A. (150 aa)    
Predicted Functional Partners:
AHF64943.1
Hypothetical protein.
       0.773
AHF64945.1
Hypothetical protein.
       0.559
AHF64946.1
Short-chain dehydrogenase/reductase (SDR) superfamily.
       0.517
AHF64947.1
Putative ferric uptake regulator, FUR family; Belongs to the Fur family.
       0.478
AHF64948.1
Hypothetical protein.
       0.478
AHF64939.1
Hypothetical protein.
       0.467
AHF64940.1
Putative multidrug efflux ABC transporter.
       0.467
AHF64941.1
ATPase.
       0.467
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.467
AHF64938.1
Hypothetical protein.
       0.410
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.