STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64947.1Putative ferric uptake regulator, FUR family; Belongs to the Fur family. (146 aa)    
Predicted Functional Partners:
AHF64948.1
Hypothetical protein.
       0.773
AHF64946.1
Short-chain dehydrogenase/reductase (SDR) superfamily.
       0.709
AHF64945.1
Hypothetical protein.
       0.652
hli5
Putative high light inducible protein.
       0.645
AHF64950.1
Hypothetical protein.
       0.509
hflX
Putative GTP-binding protein, transporter associated; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
  
  
 0.498
AHF64943.1
Hypothetical protein.
       0.478
AHF64944.1
Putative protein phosphatase 2A.
       0.478
AHF64687.1
Putative transcriptional regulator.
  
    0.476
glsF
Glutamate synthase (NADPH).
     
 0.469
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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