STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64947.1Putative ferric uptake regulator, FUR family; Belongs to the Fur family. (146 aa)    
Predicted Functional Partners:
AHF64948.1
Hypothetical protein.
       0.773
AHF64946.1
Short-chain dehydrogenase/reductase (SDR) superfamily.
       0.709
AHF64945.1
Hypothetical protein.
       0.652
hli5
Putative high light inducible protein.
       0.645
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.605
AHF64687.1
Putative transcriptional regulator.
  
    0.564
AHF64420.1
Thioredoxin reductase.
  
 
 0.537
glsF
Glutamate synthase (NADPH).
     
 0.523
AHF64950.1
Hypothetical protein.
       0.509
hflX
Putative GTP-binding protein, transporter associated; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
  
  
 0.488
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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