STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
urtCPutative membrane protein of ABC transport system; Belongs to the binding-protein-dependent transport system permease family. (375 aa)    
Predicted Functional Partners:
urtE
Putative ATP-binding subunit of urea ABC transport system.
 
 0.999
urtB
Putative urea ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
urtA1
Putative urea ABC transporter, urea binding protein.
 
 
 0.999
urtD
Putative ATP-binding subunit of urea ABC transport system.
 
 0.998
glsF
Glutamate synthase (NADPH).
     
 0.608
ureE
Urease accessory protein E; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
   
 0.576
ureF
Urease accessory protein F; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.570
ureD
Urease accessory protein D; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.540
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
      
 0.512
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
     
 0.412
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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