STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64998.1Amidase, hydantoinase/carbamoylase. (400 aa)    
Predicted Functional Partners:
AHF62933.1
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.818
AHF64997.1
Hypothetical protein.
 
     0.811
pyrB-2
Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
     0.572
asnB
Asparagine synthase, glutamine-hydrolyzing.
 
   
 0.556
AHF65002.1
Sodium:solute transporter family, possible urea transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.518
codA
Putative cytosine deaminase.
 
  
 0.417
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 
 0.409
solA
Putative sarcosine oxidase.
  
  
 0.404
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.403
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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