STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF65002.1Sodium:solute transporter family, possible urea transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (476 aa)    
Predicted Functional Partners:
asnB
Asparagine synthase, glutamine-hydrolyzing.
 
   
 0.802
pyrB-2
Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
     0.796
AHF65003.1
Hypothetical protein.
       0.773
AHF65001.1
Hypothetical protein.
       0.732
AHF62933.1
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.616
AHF64407.1
Putative sodium-dependent transporter, NSS family.
  
  
 0.550
AHF64998.1
Amidase, hydantoinase/carbamoylase.
 
     0.518
AHF65004.1
Hypothetical protein.
       0.492
AHF65005.1
Hypothetical protein.
       0.492
AHF65006.1
Transglutaminase-like protein.
       0.492
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.