Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acnBAconitate hydratase 2; Belongs to the aconitase/IPM isomerase family. (860 aa)    
Predicted Functional Partners:
icd
Isocitrate dehydrogenase.
  
 
 0.985
gltA
2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family.
  
 
 0.961
AHF65044.1
Putative chloride channel.
       0.706
aroF
Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
       0.622
glsF
Glutamate synthase (NADPH).
      
 0.583
AHF63691.1
Hypothetical protein.
   
  
 0.447
AHF65045.1
Hypothetical protein.
       0.436
glgC
Glucose-1-phosphate adenylyltransferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
      
 0.405
psbB
Photosystem II chlorophyll-binding protein CP47; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.
      
 0.404
rbcS
Ribulose-bisphosphate carboxylase.
      
 0.404
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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