STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF65065.1Hypothetical protein. (485 aa)    
Predicted Functional Partners:
uvrA
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.776
AHF65069.1
Hypothetical protein.
 
     0.765
AHF63062.1
Hypothetical protein.
  
     0.752
AHF62669.1
Hypothetical protein.
  
     0.742
AHF64023.1
Hypothetical protein.
  
     0.716
AHF63286.1
Hypothetical protein.
  
     0.711
AHF63682.1
Hypothetical protein.
  
     0.688
AHF64228.1
Cell division protein FtsQ.
  
     0.683
AHF63411.1
Putative porin; Belongs to the OprB family.
  
     0.674
AHF64832.1
Hypothetical protein.
  
     0.671
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.