STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62966.1PFAM: Ion transport 2; KEGG: pmf:P9303_19221 hypothetical protein. (246 aa)    
Predicted Functional Partners:
EHA62967.1
KEGG: pmt:PMT0473 NADH-ubiquinone/plastoquinone.
 
     0.812
gyrB
DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
    
 
 0.734
EHA62965.1
KEGG: syn:slr0942 aldehyde reductase; PFAM: NADP-dependent oxidoreductase domain.
       0.620
EHA58637.1
PFAM: Sulfatase; KEGG: pmt:PMT1515 sulfatase.
  
     0.613
EHA63311.1
PFAM: Domain of unknown function DUF1214; Domain of unknown function DUF1254; KEGG: pfl:PFL_2854 putative lipoprotein.
  
     0.610
EHA63310.1
PFAM: Domain of unknown function DUF1214; Domain of unknown function DUF1254; KEGG: rle:RL1925 hypothetical protein.
  
     0.608
EHA58627.1
PFAM: Domain of unknown function DUF1214; Domain of unknown function DUF1254; KEGG: pmf:P9303_04201 hypothetical protein.
  
     0.600
EHA58628.1
PFAM: Domain of unknown function DUF1254; Domain of unknown function DUF1214; KEGG: pmf:P9303_04191 hypothetical protein.
  
     0.600
EHA58565.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: pmt:PMT0851 serine/threonine specific protein phosphatase.
  
  
  0.580
EHA58632.1
KEGG: pmt:PMT1514 neuromedin U.
  
    0.553
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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