STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62967.1KEGG: pmt:PMT0473 NADH-ubiquinone/plastoquinone. (284 aa)    
Predicted Functional Partners:
EHA62966.1
PFAM: Ion transport 2; KEGG: pmf:P9303_19221 hypothetical protein.
 
     0.812
EHA59342.1
TIGRFAM: Glutamate decarboxylase; KEGG: pmf:P9303_18041 glutamate decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; Belongs to the group II decarboxylase family.
 
     0.711
EHA62965.1
KEGG: syn:slr0942 aldehyde reductase; PFAM: NADP-dependent oxidoreductase domain.
       0.620
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.550
EHA58624.1
PFAM: Domain of unknown function DUF1214; Domain of unknown function DUF1254; KEGG: pmf:P9303_03471 hypothetical protein.
  
     0.453
EHA58625.1
PFAM: Domain of unknown function DUF1214; Domain of unknown function DUF1254; KEGG: pmf:P9303_03471 hypothetical protein.
  
     0.440
EHA61960.1
PFAM: Uncharacterised conserved protein UCP014873, membrane associated; KEGG: syf:Synpcc7942_0096 hypothetical protein.
  
     0.430
EHA63308.1
PFAM: Domain of unknown function DUF1214; KEGG: cps:CPS_0844 putative lipoprotein.
  
     0.404
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.