STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63001.1KEGG: pmf:P9303_05891 hypothetical protein. (252 aa)    
Predicted Functional Partners:
EHA63002.1
Hypothetical protein.
       0.773
EHA64383.1
KEGG: pmf:P9303_18001 hypothetical protein.
  
     0.757
EHA63464.1
KEGG: pmf:P9303_15591 hypothetical protein.
  
     0.744
EHA63595.1
KEGG: pmf:P9303_18781 hypothetical protein.
  
     0.744
EHA64295.1
KEGG: pmf:P9303_06101 hypothetical protein.
  
     0.727
EHA63000.1
Protein of unknown function UPF0047; KEGG: pmf:P9303_07151 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047.
       0.714
EHA63004.1
PFAM: Ferredoxin; KEGG: pmt:PMT1184 hypothetical protein.
 
     0.702
EHA63192.1
Protein of unknown function DUF2488; PFAM: Uncharacterised protein family Ycf54; KEGG: syf:Synpcc7942_0988 hypothetical protein.
  
     0.682
EHA64390.1
PFAM: Protein of unknown function DUF1825; KEGG: pmf:P9303_05601 hypothetical protein.
  
     0.680
psb27
Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.673
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.