STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63003.1Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pmt:PMT0918 integral membrane protein, DUF6. (290 aa)    
Predicted Functional Partners:
EHA63004.1
PFAM: Ferredoxin; KEGG: pmt:PMT1184 hypothetical protein.
 
     0.799
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
       0.645
EHA63001.1
KEGG: pmf:P9303_05891 hypothetical protein.
       0.613
EHA63002.1
Hypothetical protein.
       0.613
EHA63000.1
Protein of unknown function UPF0047; KEGG: pmf:P9303_07151 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047.
       0.568
EHA63984.1
PFAM: Uncharacterised protein family YphA; KEGG: pmh:P9215_15891 hypothetical protein.
  
 
   0.513
EHA60435.1
Protein of unknown function DUF1257; PFAM: Uncharacterised protein family Ycf35; KEGG: pmf:P9303_04461 hypothetical protein.
  
     0.507
EHA60385.1
PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: pmf:P9303_04951 putative aminopeptidase P; Belongs to the peptidase M24B family.
     
 0.505
EHA63006.1
PFAM: Mammalian cell entry-related; KEGG: tye:THEYE_A1893 mce related protein.
       0.463
EHA63007.1
Hypothetical protein.
       0.463
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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