Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA63003.1Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pmt:PMT0918 integral membrane protein, DUF6. (290 aa)    
Predicted Functional Partners:
EHA63004.1
PFAM: Ferredoxin; KEGG: pmt:PMT1184 hypothetical protein.
 
     0.799
EHA63142.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
     
  0.680
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
       0.645
EHA63984.1
PFAM: Uncharacterised protein family YphA; KEGG: pmh:P9215_15891 hypothetical protein.
  
 
   0.614
EHA63001.1
KEGG: pmf:P9303_05891 hypothetical protein.
       0.613
EHA63002.1
Hypothetical protein.
       0.613
EHA63000.1
Protein of unknown function UPF0047; KEGG: pmf:P9303_07151 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047.
       0.568
EHA62457.1
KEGG: gvi:glr1903 hypothetical protein.
    
  0.549
EHA58637.1
PFAM: Sulfatase; KEGG: pmt:PMT1515 sulfatase.
    
  0.549
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
     
  0.545
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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