STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63020.1KEGG: pmj:P9211_12261 hypothetical protein. (71 aa)    
Predicted Functional Partners:
EHA63021.1
PFAM: Methyltransferase type 11; KEGG: pmt:PMT1171 methyltransferase.
       0.655
EHA63019.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: pmf:P9303_08511 putative chaperon-like protein for quinone binding in photosystem II.
       0.593
petM
PetM of cytochrome b6f complex subunit 7; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
       0.502
EHA63017.1
PFAM: N2,N2-dimethylguanosine tRNA methyltransferase; KEGG: pmf:P9303_08491 N2,N2-dimethylguanosine tRNA methyltransferase.
       0.423
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.