Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
EHA63050.1KEGG: gvi:gll1416 hypothetical protein. (226 aa)    
Predicted Functional Partners:
EHA63049.1
Hypothetical protein.
       0.773
EHA63051.1
PFAM: Major facilitator superfamily MFS-1; KEGG: pmj:P9211_11461 major facilitator superfamily multidrug-efflux transporter.
       0.773
EHA63283.1
PFAM: Methyltransferase type 12; KEGG: pmt:PMT0792 hypothetical protein.
    
  0.653
EHA63490.1
PFAM: Methyltransferase type 12; KEGG: pmf:P9303_18721 hypothetical protein.
    
  0.653
EHA64418.1
PFAM: Methyltransferase type 12; KEGG: pme:NATL1_17731 hypothetical protein.
    
  0.653
EHA62381.1
PFAM: Methyltransferase type 11; KEGG: pmc:P9515_14091 hypothetical protein.
    
  0.653
EHA61812.1
TIGRFAM: Magnesium protoporphyrin O-methyltransferase; KEGG: pmt:PMT2040 Mg-protoporphyrin IX methyl transferase; PFAM: Magnesium-protoporphyrin IX methyltransferase, C-terminal.
    
  0.653
EHA60407.1
PFAM: Methyltransferase type 12; KEGG: pmf:P9303_04751 methyltransferase.
    
  0.653
EHA63052.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT1147 putative dienelactone hydrolase.
 
     0.634
EHA60186.1
KEGG: pmt:PMT1019 hypothetical protein.
  
     0.586
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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