STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63050.1KEGG: gvi:gll1416 hypothetical protein. (226 aa)    
Predicted Functional Partners:
EHA63049.1
Hypothetical protein.
       0.773
EHA63051.1
PFAM: Major facilitator superfamily MFS-1; KEGG: pmj:P9211_11461 major facilitator superfamily multidrug-efflux transporter.
       0.773
EHA63052.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT1147 putative dienelactone hydrolase.
 
     0.634
EHA60186.1
KEGG: pmt:PMT1019 hypothetical protein.
  
     0.586
EHA64336.1
KEGG: pmf:P9303_06541 ADP-heptose:LPS heptosyltransferase.
  
     0.581
EHA60225.1
KEGG: pmt:PMT0199 hypothetical protein.
  
     0.570
EHA64134.1
PFAM: Protein of unknown function DUF2231, transmembrane; KEGG: pmh:P9215_16611 hypothetical protein; overlaps another CDS with the same product name.
  
     0.527
EHA62203.1
PFAM: Protein of unknown function DUF2555; KEGG: pmf:P9303_23881 hypothetical protein.
  
     0.511
EHA64393.1
KEGG: pmt:PMT1406 hypothetical protein.
  
     0.503
EHA64135.1
PFAM: Protein of unknown function DUF2231, transmembrane; KEGG: pmc:P9515_12621 hypothetical protein; overlaps another CDS with the same product name.
  
     0.493
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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