STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63054.1ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: pmt:PMT1145 ABC transporter substrate-binding protein. (527 aa)    
Predicted Functional Partners:
EHA63053.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pmf:P9303_08851 putative ABC transporter, oligopeptides.
 
 0.998
EHA60165.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pmt:PMT0266 putative ABC transporter, oligopeptides.
 
 0.992
EHA61851.1
Nickel-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_28051 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
 
 0.951
EHA63226.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmt:PMT0893 ABC transporter for amino acids, ATP binding component; SMART: ATPase, AAA+ type, core.
  
  
 0.770
EHA64327.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_06461 putative multidrug efflux ABC transporter; SMART: ATPase, AAA+ type, core.
    
 0.756
EHA63055.1
KEGG: pmj:P9211_11411 hypothetical protein.
       0.608
EHA59278.1
KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
      
 0.604
EHA63830.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter ATP-binding subunit, DevA type; KEGG: pmt:PMT0587 ABC transporter, ATP-binding component; PFAM: ABC transporter-like.
     
 0.575
EHA64310.1
PFAM: ABC transporter-like; KEGG: pmn:PMN2A_1766 ATPase; SMART: ATPase, AAA+ type, core.
     
 0.575
EHA60472.1
KEGG: pmt:PMT1540 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
   
 
  0.569
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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