STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63062.1Carbonic anhydrase; KEGG: bbt:BBta_6172 putative carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase. (246 aa)    
Predicted Functional Partners:
EHA63177.1
KEGG: tel:tlr0843 ferripyochelin binding protein.
  
 
 0.964
EHA64164.1
PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: pmj:P9211_05531 ribulose bisphosphate carboxylase, small chain; SMART: Ribulose bisphosphate carboxylase, small chain.
    
 0.920
cynS
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
  
 
 0.904
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
    
 0.882
EHA62043.1
PFAM: Formate/nitrite transporter; KEGG: pmf:P9303_29881 formate and nitrite transporters.
  
  
 0.840
EHA63257.1
PFAM: Phosphoribosyltransferase; KEGG: pmt:PMT0810 adenine phosphoribosyltransferase.
   
    0.635
EHA63232.1
PFAM: Sulphate transporter; KEGG: pmf:P9303_12181 putative sulfate transporter.
 
 
 0.494
panC/cmk
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
     
 0.492
EHA64132.1
PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: syn:sll0834 bicarbonate transporter.
 
 
 0.438
cbbL
Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.
    
 
 0.422
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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