STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63098.1TIGRFAM: Uncharacterised protein family HDIG; PFAM: Metal-dependent phosphohydrolase, 7TM extracellular domain; Metal-dependent phosphohydrolase, 7TM intracellular domain; Metal-dependent phosphohydrolase, HD subdomain; KEGG: pmt:PMT1111 hypothetical protein; SMART: Metal-dependent phosphohydrolase, HD domain. (701 aa)    
Predicted Functional Partners:
folD
Bifunctional protein folD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.607
EHA63100.1
PFAM: Polyprenyl synthetase; KEGG: pmf:P9303_09331 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.527
EHA63101.1
PFAM: Acid phosphatase/vanadium-dependent haloperoxidase-related; KEGG: pmf:P9303_09341 hypothetical protein.
       0.527
EHA63102.1
KEGG: pmf:P9303_09351 exodeoxyribonuclease V.
       0.491
EHA63338.1
single-stranded-DNA-specific exonuclease RecJ; KEGG: pmf:P9303_14521 serine/threonine specific protein phosphatase; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1.
  
   
 0.469
dacA
Conserved hypothetical protein CHP00159; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
  
  
 0.421
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.