STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63117.1Cyclase/dehydrase; PFAM: Streptomyces cyclase/dehydrase; KEGG: pmt:PMT1100 hypothetical protein. (166 aa)    
Predicted Functional Partners:
EHA63235.1
KEGG: pmf:P9303_12241 hypothetical protein.
  
     0.740
EHA60366.1
KEGG: pmt:PMT1440 hypothetical protein.
  
     0.734
EHA62471.1
PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; KEGG: gvi:gll4226 modular polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
    
 0.697
EHA62472.1
KR domain protein; KEGG: gvi:gll4226 modular polyketide synthase; PFAM: Polyketide synthase, KR; SMART: Polyketide synthase/Fatty acid synthase, KR.
    
 0.697
EHA63149.1
PFAM: Photosystem II PsbP, oxygen evolving complex; KEGG: pmf:P9303_09721 photosystem II oxygen evolving complex protein PsbP.
  
     0.687
EHA61783.1
KEGG: pmt:PMT2008 hypothetical protein.
  
     0.675
EHA63116.1
KEGG: pmt:PMT1101 oxidoreductase; PFAM: Oxidoreductase FAD/NAD(P)-binding.
 
     0.673
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.673
EHA64190.1
PFAM: Protein of unknown function DUF1092; KEGG: pmt:PMT1234 hypothetical protein.
  
     0.630
EHA63626.1
PFAM: Protein of unknown function DUF1350; KEGG: pmt:PMT0388 hypothetical protein.
  
     0.625
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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