Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EHA63128.1Helix-turn-helix domain protein; KEGG: pmt:PMT1070 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3. (282 aa)    
Predicted Functional Partners:
EHA63895.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pmf:P9303_17481 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.792
EHA63129.1
TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: pmt:PMT1069 putative pseudouridylate synthase specific to ribosomal small subunit; SMART: RNA-binding S4.
       0.750
EHA64046.1
PFAM: Protein of unknown function DUF490; KEGG: pmt:PMT0438 hypothetical protein.
  
     0.708
EHA62188.1
KEGG: pmj:P9211_06741 hypothetical protein.
    
 
 0.696
EHA62452.1
KEGG: pmf:P9303_01791 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl.
    
 
 0.696
EHA62204.1
KEGG: pmf:P9303_07051 hypothetical protein.
  
     0.695
EHA61865.1
KEGG: pmf:P9303_27921 hypothetical protein.
  
     0.677
EHA62251.1
KEGG: pmf:P9303_24661 hypothetical protein.
  
    0.664
EHA60111.1
PFAM: Polypeptide-transport-associated, FtsQ-type; KEGG: pmt:PMT0320 hypothetical protein.
  
   
 0.648
EHA59094.1
KEGG: pmf:P9303_30181 esterase/lipase/thioesterase family protein.
  
     0.648
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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