STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63135.1KEGG: pmt:PMT1064 hypothetical protein. (212 aa)    
Predicted Functional Partners:
EHA63137.1
KEGG: pmf:P9303_09901 putative glycerol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type.
       0.812
EHA63138.1
KEGG: pmf:P9303_09911 ClpC; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; Belongs to the ClpA/ClpB family.
       0.811
EHA63136.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: pmf:P9303_09891 alpha/beta hydrolase fold.
       0.800
EHA63691.1
KEGG: syc:syc1602_d hypothetical protein.
  
     0.768
EHA61800.1
KEGG: pmf:P9303_26941 hypothetical protein.
  
     0.768
EHA62058.1
TIGRFAM: Photosystem II PsbQ, cyanobacteria; KEGG: cyj:Cyan7822_5451 photosystem II protein PsbQ.
  
     0.766
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
  
     0.764
pcxA
Envelope membrane protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the CemA family.
  
     0.763
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
  
     0.763
EHA64392.1
KEGG: syn:sll1386 hypothetical protein.
  
     0.761
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.