STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63155.1KEGG: pmt:PMT1079 membrane bound transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator. (302 aa)    
Predicted Functional Partners:
EHA63438.1
KEGG: pmf:P9303_15321 hypothetical protein; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB; PFAM: Polysaccharide pyruvyl transferase.
 
     0.733
EHA63153.1
KEGG: cyn:Cyan7425_3675 protein of unknown function DUF939.
       0.727
EHA63154.1
KEGG: cyn:Cyan7425_3675 protein of unknown function DUF939.
       0.727
EHA63885.1
KEGG: pmf:P9303_17371 hydrolase of the HAD superfamily protein; TIGRFAM: HAD-superfamily phosphatase, subfamily IIIA; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Protein of unknown function DUF2010.
  
     0.624
EHA59277.1
KEGG: pmf:P9303_23591 hypothetical protein.
 
     0.622
EHA62274.1
TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; KEGG: pmt:PMT1864 glycosyl transferase family protein; PFAM: Glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
 
   
 0.598
EHA63156.1
PFAM: Cation/H+ exchanger; UspA; KEGG: cya:CYA_1366 monovalent cation:proton antiporter-2 (CPA2) family protein.
       0.580
EHA62306.1
Uncharacterized protein family UPF0052; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.548
EHA63157.1
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: pmt:PMT1080 multidrug ABC transporter; SMART: ATPase, AAA+ type, core.
       0.513
EHA62256.1
PFAM: Glycosyl transferase, family 4; KEGG: pmt:PMT1846 glycosyl transferase family protein.
  
  
 0.505
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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