STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63208.1PFAM: Radical SAM; KEGG: pmt:PMT0862 hypothetical protein. (364 aa)    
Predicted Functional Partners:
EHA63021.1
PFAM: Methyltransferase type 11; KEGG: pmt:PMT1171 methyltransferase.
   
 0.918
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.889
EHA62037.1
PFAM: ThiamineS; KEGG: mca:MCA3054 molybdopterin converting factor, subunit 1.
 
  
 0.814
EHA64144.1
PFAM: Protein of unknown function DUF2064; KEGG: pmf:P9303_08281 hypothetical protein.
 
     0.797
EHA63209.1
TIGRFAM: Glucosylglycerol-phospate 3-phosphatase; KEGG: pmt:PMT0863 putative glucosylglycerolphosphate phosphatase; PFAM: Glucosylglycerol-phospate 3-phosphatase.
       0.785
EHA64145.1
PFAM: Glycosyl transferase, family 2; KEGG: pmf:P9303_08261 cell wall biosynthesis glycosyltransferase.
  
     0.769
EHA62036.1
PFAM: Molybdopterin biosynthesis MoaE; KEGG: mca:MCA3055 molybdopterin converting factor, subunit 2.
    
 0.741
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
    
 0.739
EHA62034.1
KEGG: bmj:BMULJ_02600 molybdenum cofactor biosynthesis protein MoaC; TIGRFAM: Molybdenum cofactor biosynthesis C; PFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain.
    
  0.732
EHA61968.1
PFAM: SNARE associated Golgi protein; KEGG: pmt:PMT2186 hypothetical protein.
 
   
 0.656
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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