Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA63223.12OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: pmf:P9303_13141 alkylated DNA repair protein. (195 aa)    
Predicted Functional Partners:
EHA63222.1
Hypothetical protein.
       0.550
EHA60469.1
HAMAP: Aspartoacylase; KEGG: pmf:P9303_04021 aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily.
  
     0.546
EHA59338.1
KEGG: pmf:P9303_22901 hypothetical protein.
     
  0.527
EHA61930.1
SNF2-related protein; KEGG: pmt:PMT2158 SNF2/helicase domain-containing protein; PFAM: SNF2-related; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.
    
  0.421
EHA59136.1
Helicase domain protein; KEGG: pmf:P9303_00371 superfamily II DNA/RNA helicases, SNF2 family protein; PFAM: Helicase, C-terminal; SNF2-related; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal.
    
  0.421
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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