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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63239.1Protein of unknown function DUF1230; PFAM: Uncharacterised protein family Ycf36; KEGG: pmn:PMN2A_0223 hypothetical protein. (164 aa)    
Predicted Functional Partners:
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.806
EHA63241.1
KEGG: pmf:P9303_13831 hypothetical protein.
       0.800
EHA63658.1
GUN4 domain protein; PFAM: GUN4-like; KEGG: pmt:PMT0606 hypothetical protein.
  
     0.768
EHA63439.1
Protein of unknown function DUF2499; PFAM: Uncharacterised protein family Ycf49; KEGG: pmt:PMT0689 hypothetical protein.
  
     0.766
EHA60434.1
KEGG: pmf:P9303_04481 3Fe-4S ferredoxin.
  
     0.766
EHA60406.1
KEGG: pmt:PMT1473 H+-transporting ATP synthase.
  
     0.753
psaL
KEGG: pma:Pro1679 photosystem I reaction center protein subunit XI; HAMAP: Photosystem I, reaction centre subunit XI; PFAM: Photosystem I PsaL, reaction centre subunit XI.
  
     0.750
EHA59415.1
PFAM: Ferredoxin; KEGG: pmt:PMT1664 ferredoxin.
  
     0.745
petA
Apocytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
  
     0.743
EHA63238.1
PFAM: L-asparaginase II; KEGG: pmf:P9303_13811 L-asparaginase II.
       0.730
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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