STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63241.1KEGG: pmf:P9303_13831 hypothetical protein. (211 aa)    
Predicted Functional Partners:
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.810
EHA63239.1
Protein of unknown function DUF1230; PFAM: Uncharacterised protein family Ycf36; KEGG: pmn:PMN2A_0223 hypothetical protein.
       0.800
EHA64047.1
PFAM: Protein of unknown function DUF2518; KEGG: pmf:P9303_18421 hypothetical protein.
  
     0.774
EHA62227.1
KEGG: pmt:PMT1818 hypothetical protein.
  
     0.774
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.774
EHA59332.1
KEGG: pmf:P9303_22961 hypothetical protein.
  
     0.774
EHA63064.1
KEGG: pmf:P9303_18171 hypothetical protein.
  
     0.773
EHA60156.1
KEGG: pmf:P9303_20651 hypothetical protein.
  
     0.773
EHA59293.1
KEGG: pmf:P9303_23411 hypothetical protein.
  
     0.773
EHA63243.1
KEGG: pmt:PMT0821 hypothetical protein.
 
     0.772
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.