STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63243.1KEGG: pmt:PMT0821 hypothetical protein. (223 aa)    
Predicted Functional Partners:
EHA63241.1
KEGG: pmf:P9303_13831 hypothetical protein.
 
     0.772
EHA61865.1
KEGG: pmf:P9303_27921 hypothetical protein.
  
     0.763
EHA64321.1
KEGG: pmt:PMT1344 hypothetical protein.
  
     0.741
EHA63949.1
KEGG: pmj:P9211_05761 hypothetical protein.
  
     0.739
EHA64392.1
KEGG: syn:sll1386 hypothetical protein.
  
     0.738
EHA59355.1
KEGG: pmf:P9303_22651 hypothetical protein.
  
     0.729
EHA60111.1
PFAM: Polypeptide-transport-associated, FtsQ-type; KEGG: pmt:PMT0320 hypothetical protein.
  
     0.723
EHA63064.1
KEGG: pmf:P9303_18171 hypothetical protein.
  
     0.714
ndhO
NAD(P)H-quinone oxidoreductase subunit O; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.712
EHA62334.1
PFAM: Glycosyl transferase, group 1; KEGG: pmf:P9303_25681 hypothetical protein.
  
     0.703
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.