STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63244.1Amino acid carrier protein; KEGG: pmf:P9303_21681 sodium:alanine symporter family protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter. (446 aa)    
Predicted Functional Partners:
EHA63243.1
KEGG: pmt:PMT0821 hypothetical protein.
       0.658
purD
Phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: pmt:PMT1416 phosphoribosylamine--glycine ligase; Belongs to the GARS family.
    
  0.658
carB
SMART: Methylglyoxal synthase-like domain; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; KEGG: pmt:PMT0822 carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; Belongs to the CarB family.
       0.586
EHA63036.1
PFAM: Sodium:neurotransmitter symporter; KEGG: pmf:P9303_08661 putative sodium-dependent transporter, NSS family protein.
 
  
 0.577
EHA62054.1
Cl- channel voltage-gated family protein; PFAM: Chloride channel, voltage gated; KEGG: pmf:P9303_29991 putative chloride channel.
  
    0.550
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.419
EHA63241.1
KEGG: pmf:P9303_13831 hypothetical protein.
       0.419
EHA62478.1
PFAM: Sodium/solute symporter; KEGG: amr:AM1_4939 Na+/pantothenate symporter PanF, putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.418
EHA63239.1
Protein of unknown function DUF1230; PFAM: Uncharacterised protein family Ycf36; KEGG: pmn:PMN2A_0223 hypothetical protein.
       0.414
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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