STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63254.1Hypothetical protein; KEGG: syf:Synpcc7942_1997 high light-inducible protein. (83 aa)    
Predicted Functional Partners:
EHA63256.1
KEGG: pmt:PMT0811 hypothetical protein.
 
     0.777
EHA63255.1
KEGG: pmt:PMT0812 2-octaprenyl-6-methoxyphenol 4-monoxygenase UbiH; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding.
       0.773
EHA59098.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT2273 hypothetical protein.
  
     0.737
EHA63253.1
KEGG: pmf:P9303_13951 hypothetical protein.
       0.723
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
  
     0.718
EHA60557.1
KEGG: ava:Ava_0829 hypothetical protein.
  
     0.718
EHA63409.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: pmt:PMT0712 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2.
  
     0.702
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
       0.698
EHA63258.1
KEGG: pmt:PMT0809 hypothetical protein.
  
     0.684
EHA63705.1
PFAM: Protein of unknown function DUF1816; KEGG: pmt:PMT0649 hypothetical protein.
  
     0.656
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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