STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63255.1KEGG: pmt:PMT0812 2-octaprenyl-6-methoxyphenol 4-monoxygenase UbiH; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding. (389 aa)    
Predicted Functional Partners:
plqA
UbiA prenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of plastoquinone-9 (PQ-9) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 4-hydroxy-3-solanesylbenzoate. Belongs to the UbiA prenyltransferase family.
  
  
 0.848
EHA63253.1
KEGG: pmf:P9303_13951 hypothetical protein.
 
    0.791
EHA63617.1
UbiD family decarboxylase; KEGG: pmf:P9303_18901 3-polyprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: Carboxylyase-related; PFAM: Carboxylyase-related; Belongs to the UbiD family.
     
 0.774
EHA63254.1
Hypothetical protein; KEGG: syf:Synpcc7942_1997 high light-inducible protein.
       0.773
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
       0.733
EHA63256.1
KEGG: pmt:PMT0811 hypothetical protein.
       0.714
EHA62381.1
PFAM: Methyltransferase type 11; KEGG: pmc:P9515_14091 hypothetical protein.
    
 0.631
EHA61778.1
Phytoene synthase; KEGG: pmj:P9211_01581 squalene and phytoene synthase; PFAM: Squalene/phytoene synthase.
   
 
 0.575
EHA63251.1
TIGRFAM: Magnesium-chelatase, subunit H; KEGG: pmf:P9303_13931 magnesium chelatase subunit H; PFAM: CobN/magnesium chelatase.
     
 0.563
EHA62471.1
PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; KEGG: gvi:gll4226 modular polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
  
 0.562
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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