STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63269.1KEGG: pmf:P9303_03631 hypothetical protein; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like). (178 aa)    
Predicted Functional Partners:
EHA63267.1
KEGG: pmn:PMN2A_1040 hypothetical protein.
       0.773
EHA63268.1
Hypothetical protein.
       0.773
EHA63270.1
PFAM: Glutamine synthetase, catalytic domain; KEGG: mar:MAE_09050 glutamate--ammonia ligase.
       0.746
EHA62255.1
TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: CinA, C-terminal; Molybdopterin binding; KEGG: pmf:P9303_24701 molybdenum cofactor biosynthesis protein; SMART: Molybdopterin binding.
    
  0.729
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.685
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.599
EHA63673.1
PFAM: Uncharacterised protein family UPF0102; KEGG: pmf:P9303_16141 hypothetical protein; Belongs to the UPF0102 family.
  
    0.456
EHA63276.1
PFAM: Staphylococcal nuclease (SNase-like); KEGG: pme:NATL1_00761 hypothetical protein.
  
     0.421
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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