STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63289.1KEGG: pmf:P9303_14241 hypothetical protein. (149 aa)    
Predicted Functional Partners:
EHA63354.1
KEGG: pmt:PMT0745 hypothetical protein.
  
     0.772
EHA59154.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: pmf:P9303_00551 putative photosystem I assembly related protein Ycf37.
  
     0.771
EHA64383.1
KEGG: pmf:P9303_18001 hypothetical protein.
  
     0.763
EHA63192.1
Protein of unknown function DUF2488; PFAM: Uncharacterised protein family Ycf54; KEGG: syf:Synpcc7942_0988 hypothetical protein.
  
     0.762
EHA64314.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: pmf:P9303_06321 hypothetical protein.
  
     0.758
EHA64346.1
KEGG: pme:NATL1_05181 hypothetical protein.
  
     0.757
EHA63286.1
KEGG: pmf:P9303_14221 hypothetical protein.
  
     0.749
EHA64129.1
KEGG: pmf:P9303_18151 hypothetical protein.
  
     0.747
EHA64295.1
KEGG: pmf:P9303_06101 hypothetical protein.
  
     0.747
EHA60541.1
PRC-barrel domain protein; PFAM: PRC-barrel; KEGG: pmf:P9303_03251 hypothetical protein.
  
     0.742
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.