STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63298.1PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: pmf:P9303_16751 putative carboxypeptidase. (255 aa)    
Predicted Functional Partners:
EHA63639.1
FHA modulated glycosyl transferase/transpeptidase; KEGG: syf:Synpcc7942_2000 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Forkhead-associated (FHA) domain; Penicillin-binding protein, transpeptidase; SMART: Forkhead-associated (FHA) domain.
     
 0.902
EHA60158.1
TIGRFAM: Penicillin-binding protein 1A; KEGG: pmf:P9303_20671 putative penicillin binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase.
     
 0.865
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
  
 0.811
EHA63299.1
PFAM: Peptidase U32; KEGG: cya:CYA_0765 U32 family peptidase.
       0.783
EHA63300.1
GTP-binding protein TypA; KEGG: pmt:PMT0575 tyrosine binding protein; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal.
       0.605
EHA63301.1
PFAM: Protein of unknown function DUF309; KEGG: pmf:P9303_16771 hypothetical protein.
       0.604
EHA63872.1
PFAM: Peptidase S66, LD-carboxypeptidase A; KEGG: pmt:PMT0538 hypothetical protein.
     
 0.601
EHA64338.1
PFAM: Peptidase S66, LD-carboxypeptidase A; KEGG: pmt:PMT1329 hypothetical protein.
     
 0.601
EHA64206.1
KEGG: pmt:PMT1249 peptidoglycan synthetase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
     
 0.583
EHA59148.1
TIGRFAM: Penicillin-binding protein 2; KEGG: pmt:PMT0048 putative penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
     
 0.583
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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