STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccsACytochrome c biogenesis protein ccsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. (315 aa)    
Predicted Functional Partners:
ccsB
Cytochrome c biogenesis protein ccs1; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
 
  
 0.970
EHA63025.1
TIGRFAM: Thioredoxin reductase; KEGG: pma:Pro1245 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain.
  
  
 0.693
EHA63304.1
PFAM: Permease YjgP/YjgQ, predicted; KEGG: pmf:P9303_16801 putative permease.
       0.681
EHA63303.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_16791 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
       0.677
EHA63302.1
OstA family protein; PFAM: Organic solvent tolerance-like, N-terminal; KEGG: pmt:PMT0573 hypothetical protein.
       0.652
EHA60413.1
PFAM: Cytochrome c assembly protein, transmembrane domain; KEGG: pmt:PMT1476 putative C-type cytochrome biogenesis protein CcdA.
  
  
 0.646
EHA60645.1
Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
 
    0.587
EHA63301.1
PFAM: Protein of unknown function DUF309; KEGG: pmf:P9303_16771 hypothetical protein.
       0.558
EHA63300.1
GTP-binding protein TypA; KEGG: pmt:PMT0575 tyrosine binding protein; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal.
       0.555
EHA62039.1
TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: pmf:P9303_29821 putative uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; Belongs to the precorrin methyltransferase family.
  
 
  0.551
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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