STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHA63326.1PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: pmf:P9303_14411 putative modulator of DNA gyrase. (455 aa)    
Predicted Functional Partners:
EHA63327.1
PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: pmt:PMT0770 putative modulator of DNA gyrase; TldD.
 
     0.956
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
       0.811
EHA63072.1
KEGG: pmf:P9303_08961 hypothetical protein.
  
     0.572
acsF
Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
       0.559
EHA63329.1
KEGG: pmt:PMT0769 hypothetical protein.
 
     0.551
EHA62336.1
KEGG: pmj:P9211_17161 hypothetical protein.
  
     0.551
EHA63705.1
PFAM: Protein of unknown function DUF1816; KEGG: pmt:PMT0649 hypothetical protein.
  
     0.495
EHA63332.1
Ribonuclease II; KEGG: pmf:P9303_14471 putative acetazolamide conferring resistance protein Zam; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA-binding domain; SMART: Ribonuclease II/R; Cold shock protein; RNA-binding domain, S1; Belongs to the RNR ribonuclease family.
 
     0.476
EHA64392.1
KEGG: syn:sll1386 hypothetical protein.
  
     0.458
EHA64384.1
KEGG: pmf:P9303_05641 hypothetical protein.
  
     0.448
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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