STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63353.1KEGG: pmf:P9303_14711 hypothetical protein. (135 aa)    
Predicted Functional Partners:
EHA63352.1
KEGG: pmf:P9303_14701 beta-propeller domain-containing protein.
 
     0.799
pcxA
Envelope membrane protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the CemA family.
 
     0.771
EHA62061.1
Porin; KEGG: pmf:P9303_26321 porin; Belongs to the OprB family.
  
     0.731
EHA61906.1
PFAM: CHASE2; KEGG: pmf:P9303_03401 hypothetical protein.
  
     0.708
EHA60637.1
KEGG: pmj:P9211_01241 hypothetical protein.
  
     0.698
EHA63368.1
Protein of unknown function DUF1239; PFAM: Lipopolysccharide assembly, LptC-related; KEGG: pmf:P9303_14731 hypothetical protein.
  
     0.697
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.682
EHA62494.1
KEGG: cyj:Cyan7822_2663 hypothetical protein.
  
     0.678
EHA60557.1
KEGG: ava:Ava_0829 hypothetical protein.
  
     0.672
EHA59170.1
PFAM: Membrane protein of unknown function; KEGG: pmt:PMT0070 hypothetical protein.
  
     0.663
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.