STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63368.1Protein of unknown function DUF1239; PFAM: Lipopolysccharide assembly, LptC-related; KEGG: pmf:P9303_14731 hypothetical protein. (405 aa)    
Predicted Functional Partners:
EHA63303.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_16791 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
  
 0.999
EHA63304.1
PFAM: Permease YjgP/YjgQ, predicted; KEGG: pmf:P9303_16801 putative permease.
   
 0.990
EHA63302.1
OstA family protein; PFAM: Organic solvent tolerance-like, N-terminal; KEGG: pmt:PMT0573 hypothetical protein.
 
 
 0.915
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.800
EHA63371.1
PFAM: Glucose-inhibited division protein A-related; KEGG: pmt:PMT0742 hypothetical protein.
 
     0.781
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
 
   
 0.774
EHA64336.1
KEGG: pmf:P9303_06541 ADP-heptose:LPS heptosyltransferase.
  
     0.773
EHA62251.1
KEGG: pmf:P9303_24661 hypothetical protein.
  
     0.771
EHA62435.1
KEGG: cyc:PCC7424_1391 heat domain containing protein.
  
     0.768
EHA62056.1
PFAM: O-antigen ligase-related; KEGG: pmf:P9303_30011 hypothetical protein.
  
   
 0.768
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.