STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63388.1KEGG: pme:NATL1_11191 hypothetical protein. (90 aa)    
Predicted Functional Partners:
EHA63888.1
KEGG: pmf:P9303_17401 hypothetical protein.
  
     0.736
EHA64249.1
KEGG: pmf:P9303_07011 hypothetical protein.
  
     0.728
EHA62334.1
PFAM: Glycosyl transferase, group 1; KEGG: pmf:P9303_25681 hypothetical protein.
  
     0.715
EHA62258.1
KEGG: pmt:PMT1848 hypothetical protein.
  
     0.714
EHA64384.1
KEGG: pmf:P9303_05641 hypothetical protein.
  
     0.680
EHA60436.1
KEGG: pme:NATL1_18781 hypothetical protein.
  
     0.651
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.640
EHA63389.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.630
EHA64363.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pmf:P9303_06851 short chain dehydrogenase.
  
     0.612
EHA61865.1
KEGG: pmf:P9303_27921 hypothetical protein.
  
     0.611
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.