STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63395.1PFAM: Deoxyribodipyrimidine photolyase-related protein; DNA photolyase, FAD-binding/Cryptochrome, C-terminal; KEGG: pmb:A9601_04781 hypothetical protein. (468 aa)    
Predicted Functional Partners:
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.806
EHA63396.1
Hypothetical protein.
       0.773
EHA64204.1
PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; KEGG: chl:Chy400_0772 deoxyribodipyrimidine photo-lyase.
 
   
 0.766
EHA64058.1
TIGRFAM: Conserved hypothetical protein CHP03643; KEGG: pmg:P9301_04451 hypothetical protein.
 
     0.708
EHA63393.1
PHP domain protein; KEGG: pmt:PMT0726 hypothetical protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal.
       0.662
EHA63394.1
KEGG: pmf:P9303_14931 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00701; PFAM: Uncharacterised protein family UPF0093.
       0.662
EHA62295.1
PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; KEGG: syf:Synpcc7942_1867 deoxyribodipyrimidine photo-lyase family protein.
 
   
 0.648
EHA62300.1
KEGG: syf:Synpcc7942_0112 deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal.
 
   
 0.619
EHA63392.1
KEGG: syf:Synpcc7942_0843 hypothetical protein.
       0.592
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.559
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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