Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
EHA63400.1D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: pmf:P9303_14981 putative D-Ala-D-Ala carboxypeptidase 3 (S13) family protein; TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C. (424 aa)    
Predicted Functional Partners:
EHA63639.1
FHA modulated glycosyl transferase/transpeptidase; KEGG: syf:Synpcc7942_2000 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Forkhead-associated (FHA) domain; Penicillin-binding protein, transpeptidase; SMART: Forkhead-associated (FHA) domain.
     
 0.881
EHA59148.1
TIGRFAM: Penicillin-binding protein 2; KEGG: pmt:PMT0048 putative penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
  
  
 0.879
EHA64206.1
KEGG: pmt:PMT1249 peptidoglycan synthetase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain.
     
 0.863
EHA63298.1
PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: pmf:P9303_16751 putative carboxypeptidase.
     
 0.860
EHA60158.1
TIGRFAM: Penicillin-binding protein 1A; KEGG: pmf:P9303_20671 putative penicillin binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase.
     
 0.859
EHA63402.1
PFAM: Domain of unknown function DUF1995; KEGG: pmf:P9303_15001 hypothetical protein.
       0.815
EHA63401.1
KEGG: pmf:P9303_14991 hypothetical protein.
       0.814
EHA64338.1
PFAM: Peptidase S66, LD-carboxypeptidase A; KEGG: pmt:PMT1329 hypothetical protein.
 
  
 0.808
EHA63872.1
PFAM: Peptidase S66, LD-carboxypeptidase A; KEGG: pmt:PMT0538 hypothetical protein.
 
  
 0.806
EHA60412.1
PFAM: Cell cycle protein; KEGG: pmf:P9303_04731 cell division protein FtsW; Belongs to the SEDS family.
     
 0.789
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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