STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63401.1KEGG: pmf:P9303_14991 hypothetical protein. (207 aa)    
Predicted Functional Partners:
EHA63402.1
PFAM: Domain of unknown function DUF1995; KEGG: pmf:P9303_15001 hypothetical protein.
 
     0.835
EHA63400.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: pmf:P9303_14981 putative D-Ala-D-Ala carboxypeptidase 3 (S13) family protein; TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C.
       0.815
EHA63712.1
KEGG: pmt:PMT0493 hypothetical protein.
  
     0.774
EHA64293.1
PFAM: Protein of unknown function DUF177; KEGG: pmf:P9303_06081 metal-binding protein.
  
     0.774
EHA60090.1
KEGG: amr:AM1_1790 hypothetical protein.
  
     0.774
EHA64156.1
KEGG: syf:Synpcc7942_0308 CO2 hydration protein; TIGRFAM: CO2 hydration; PFAM: CO2 hydration.
  
     0.773
EHA59331.1
PFAM: Protein of unknown function DUF1815; KEGG: syf:Synpcc7942_0657 hypothetical protein.
  
     0.770
EHA63978.1
KEGG: pmf:P9303_15411 hypothetical protein.
  
     0.769
EHA63008.1
KEGG: pmt:PMT1182 hypothetical protein.
  
     0.767
EHA62203.1
PFAM: Protein of unknown function DUF2555; KEGG: pmf:P9303_23881 hypothetical protein.
  
     0.766
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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