Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EHA63409.1N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: pmt:PMT0712 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2. (306 aa)    
Predicted Functional Partners:
EHA60643.1
PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: pmf:P9303_26161 beta-N-acetylglucosaminidase.
    
 0.809
EHA63410.1
KEGG: pmf:P9303_15101 PDZ domain-containing protein; PFAM: Peptidase M61; SMART: PDZ/DHR/GLGF.
       0.783
EHA63411.1
KEGG: cyb:CYB_1143 hypothetical protein.
       0.773
EHA60366.1
KEGG: pmt:PMT1440 hypothetical protein.
  
     0.759
EHA64110.1
KEGG: syf:Synpcc7942_0716 hypothetical protein.
  
     0.758
EHA63716.1
Hypothetical protein; KEGG: syf:Synpcc7942_0136 phage integrase.
  
     0.753
EHA64198.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: pmf:P9303_07651 phage integrase family.
  
     0.752
EHA63256.1
KEGG: pmt:PMT0811 hypothetical protein.
  
     0.751
EHA63072.1
KEGG: pmf:P9303_08961 hypothetical protein.
 
   
 0.750
EHA63235.1
KEGG: pmf:P9303_12241 hypothetical protein.
  
     0.750
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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