Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA63410.1KEGG: pmf:P9303_15101 PDZ domain-containing protein; PFAM: Peptidase M61; SMART: PDZ/DHR/GLGF. (565 aa)    
Predicted Functional Partners:
EHA63409.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: pmt:PMT0712 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2.
       0.783
EHA63411.1
KEGG: cyb:CYB_1143 hypothetical protein.
       0.773
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.570
EHA64420.1
UPF0082 protein yeeN; TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: pmf:P9303_05381 hypothetical protein; PFAM: Protein of unknown function DUF28.
      
 0.503
EHA60470.1
PFAM: Glutathione S-transferase, C-terminal; KEGG: pmf:P9303_04011 glutathione S-transferase C terminus protein.
      
 0.503
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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