STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63438.1KEGG: pmf:P9303_15321 hypothetical protein; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB; PFAM: Polysaccharide pyruvyl transferase. (368 aa)    
Predicted Functional Partners:
EHA62274.1
TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; KEGG: pmt:PMT1864 glycosyl transferase family protein; PFAM: Glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
   
 0.892
EHA63155.1
KEGG: pmt:PMT1079 membrane bound transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator.
 
     0.733
EHA63125.1
KEGG: pmt:PMT1072 LytR-membrane bound transcriptional regulator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator.
 
     0.703
EHA59079.1
S-layer domain-containing protein; PFAM: S-layer homology domain; KEGG: pmt:PMT1979 porin; Belongs to the OprB family.
  
     0.699
EHA61750.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmf:P9303_26321 porin; Belongs to the OprB family.
  
     0.692
EHA63613.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmt:PMT0284 porin; Belongs to the OprB family.
  
     0.678
EHA62242.1
KEGG: pmf:P9303_24571 hypothetical protein.
  
     0.672
EHA63635.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmt:PMT0998 porin; Belongs to the OprB family.
  
     0.668
EHA63384.1
SpoIID/LytB domain protein; KEGG: pmf:P9303_14861 hypothetical protein; TIGRFAM: Sporulation stage II protein D, amidase enhancer LytB; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal.
  
     0.666
EHA61751.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmt:PMT1979 porin; Belongs to the OprB family.
  
     0.651
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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