STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63439.1Protein of unknown function DUF2499; PFAM: Uncharacterised protein family Ycf49; KEGG: pmt:PMT0689 hypothetical protein. (104 aa)    
Predicted Functional Partners:
EHA63440.1
KEGG: pmf:P9303_15341 hypothetical protein.
 
     0.956
EHA60434.1
KEGG: pmf:P9303_04481 3Fe-4S ferredoxin.
  
     0.774
EHA63658.1
GUN4 domain protein; PFAM: GUN4-like; KEGG: pmt:PMT0606 hypothetical protein.
  
     0.773
EHA63239.1
Protein of unknown function DUF1230; PFAM: Uncharacterised protein family Ycf36; KEGG: pmn:PMN2A_0223 hypothetical protein.
  
     0.766
EHA64226.1
KEGG: pmf:P9303_07351 hypothetical protein.
  
     0.762
EHA60545.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: pmf:P9303_03211 hypothetical protein.
  
     0.760
EHA60648.1
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
     0.753
EHA62201.1
PFAM: Photosystem II PsbO, manganese-stabilising; KEGG: syf:Synpcc7942_0294 photosystem II manganese-stabilizing polypeptide.
  
     0.751
EHA64295.1
KEGG: pmf:P9303_06101 hypothetical protein.
  
     0.744
EHA64190.1
PFAM: Protein of unknown function DUF1092; KEGG: pmt:PMT1234 hypothetical protein.
  
     0.740
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.