STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63448.1PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: pmf:P9303_15441 putative ABC transporter. (409 aa)    
Predicted Functional Partners:
EHA64310.1
PFAM: ABC transporter-like; KEGG: pmn:PMN2A_1766 ATPase; SMART: ATPase, AAA+ type, core.
 0.998
EHA63830.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter ATP-binding subunit, DevA type; KEGG: pmt:PMT0587 ABC transporter, ATP-binding component; PFAM: ABC transporter-like.
 0.993
EHA63044.1
Efflux transporter, RND family, MFP subunit; KEGG: pmf:P9303_08701 membrane fusion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.961
EHA63226.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmt:PMT0893 ABC transporter for amino acids, ATP binding component; SMART: ATPase, AAA+ type, core.
 
   
  0.937
EHA60587.1
Efflux transporter, RND family, MFP subunit; KEGG: pmf:P9303_02661 membrane-fusion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.862
EHA62498.1
Efflux transporter, RND family, MFP subunit; KEGG: pmt:PMT0130 hypothetical protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.856
EHA63526.1
KEGG: cyt:cce_0005 hypothetical protein.
   
 0.832
EHA63447.1
TIGRFAM: Pyruvate kinase; KEGG: pmf:P9303_15431 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; PEP-utilising enzyme, mobile domain; Belongs to the pyruvate kinase family.
       0.770
EHA63152.1
PFAM: Outer membrane efflux protein; KEGG: syf:Synpcc7942_1761 hypothetical protein.
    
 0.720
EHA62214.1
PFAM: Outer membrane efflux protein; KEGG: pmt:PMT0980 outer membrane efflux protein.
    
 0.720
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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