Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA63467.1Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: pmj:P9211_07941 putative transcripton factor. (285 aa)    
Predicted Functional Partners:
EHA63212.1
SMC domain protein; PFAM: RecF/RecN/SMC; KEGG: pmf:P9303_13301 RecF protein:ABC transporter.
  
 0.973
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 0.947
EHA62201.1
PFAM: Photosystem II PsbO, manganese-stabilising; KEGG: syf:Synpcc7942_0294 photosystem II manganese-stabilizing polypeptide.
  
  0.884
EHA63466.1
KEGG: pmf:P9303_15611 hypothetical protein.
       0.784
EHA60243.1
TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: pmf:P9303_21731 superfamily II DNA helicase; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.
   
 0.767
EHA60382.1
30S ribosomal protein 3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
  
     0.745
recA
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 0.735
EHA63469.1
KEGG: mxa:MXAN_6073 hypothetical protein.
  
  0.732
EHA60080.1
KEGG: pmf:P9303_19571 hypothetical protein.
  
     0.723
EHA63658.1
GUN4 domain protein; PFAM: GUN4-like; KEGG: pmt:PMT0606 hypothetical protein.
  
     0.720
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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