STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA63474.1PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; KEGG: pmf:P9303_28691 hypothetical protein. (171 aa)    
Predicted Functional Partners:
EHA60238.1
KEGG: mrb:Mrub_0437 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; Belongs to the FGGY kinase family.
    
 0.976
EHA59338.1
KEGG: pmf:P9303_22901 hypothetical protein.
    
 0.960
EHA64092.1
PFAM: Phosphoesterase, DHHA1; KEGG: pmf:P9303_28371 alanyl-tRNA synthetase.
   
 0.932
EHA64093.1
Hypothetical protein; KEGG: pmf:P9303_28371 alanyl-tRNA synthetase.
   
 0.932
EHA64098.1
PFAM: Phosphoesterase, DHHA1; KEGG: pmt:PMT2157 alanyl-tRNA synthetase.
   
 0.932
EHA61923.1
PFAM: Phosphoesterase, DHHA1; KEGG: pmt:PMT2157 alanyl-tRNA synthetase.
   
 0.932
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.932
EHA58557.1
KEGG: fri:FraEuI1c_0484 putative esterase lipoprotein.
 
 
 0.931
EHA62460.1
KEGG: fri:FraEuI1c_0484 putative esterase lipoprotein.
   
 0.922
EHA63430.1
KEGG: pmf:P9303_15251 heat shock protein 90; PFAM: ATPase-like, ATP-binding domain; Heat shock protein Hsp90, C-terminal; SMART: ATPase-like, ATP-binding domain.
   
 0.901
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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